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ExpBites - Analyzing Human Exposure to Mosquito Biting

Tools to analyse human and mosquito behavioral interactions and to compute exposure to mosquito bites estimates. Using behavioral data for human individuals and biting patterns for mosquitoes, you will be able to compute hourly exposure for bed net users and non-users, and summarize (e.g. proportion indoors and outdoors, proportion per time periods, and proportion prevented by bed nets) or visualize these dynamics across a 24-hour cycle.

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4.00 score 4 stars 2 scripts 178 downloads

mfclim - Download Archived Meteorological Data from 'Meteo-France'

Download meteorological data from the 'Meteo-France' public API 'Données climatologiques' <https://portail-api.meteofrance.fr> and 'SYNOP' open data archives <https://meteo.data.gouv.fr/datasets/686f8595b351c06a3a790867>. It provides functions to authenticate, list stations, retrieve station metadata, request data, download files, and import data directly into 'R'.

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3.88 score 3 stars 4 scripts 336 downloads

ecoXCorr - Lagged Cross-Correlation Analysis of Environmental Time Series

Tools for analysing lagged relationships between environmental variables and ecological or epidemiological time series. The package implements a workflow to aggregate meteorological data over multiple lagged intervals, fit regression models, including mixed-effect models using 'glmmTMB', for each lag window, and visualise varied models outcomes (effect strength and direction, model prediction error...) using cross-correlation maps ('CCM').

Last updated

3.65 score 1 stars 452 downloads

InsectLabelR - Create Labels for Insect in Collection

Streamlines the creation of high-quality labels for insect pinning. By taking a dataset as input, the package allow to generate printable labels in 'LaTeX' and PDF format, helping researchers and entomologists maintain accurate and standardized specimen records. Requires a compatible installation of 'pdflatex' (e.g. <https://www.tug.org/texlive/>). For enhanced accessibility, the package includes a user-friendly 'shiny' application (accessible online <https://nicolas-moiroux.shinyapps.io/InsectLabelR/>), which provides a graphical interface for generating labels without requiring programming expertise.

Last updated

3.30 score 2 scripts 193 downloads