{
  "_id": "6a1bd9ab1d7bb097a0a16cf1",
  "Type": "Package",
  "Package": "ecoXCorr",
  "Title": "Lagged Cross-Correlation Analysis of Environmental Time Series",
  "Version": "0.2.2",
  "Authors@R": "c(\nperson(\"Nicolas\", \"Moiroux\", , \"nicolas.moiroux@ird.fr\", role = c(\"aut\", \"cre\"),\ncomment = c(ORCID = \"0000-0001-6755-6167\")),\nperson(\"Colombine\", \"Bartholomée\", , \"colombine.bartholomee@ird.fr\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-7291-5195\")),\nperson(\"Paul\", \"Taconet\", , \"paul.taconet@ird.fr\", role = \"aut\",\ncomment = c(ORCID = \"0000-0001-7429-7204\"))\n)",
  "Description": "Tools for analysing lagged relationships between\nenvironmental variables and ecological or epidemiological time\nseries. The package implements a workflow to aggregate\nmeteorological data over multiple lagged intervals, fit\nregression models, including mixed-effect models using\n'glmmTMB', for each lag window, and visualise varied models\noutcomes (effect strength and direction, model prediction\nerror...) using cross-correlation maps ('CCM').",
  "License": "GPL (>= 3)",
  "URL": "https://github.com/Nmoiroux/ecoXCorr",
  "BugReports": "https://github.com/Nmoiroux/ecoXCorr/issues",
  "RdMacros": "Rdpack",
  "Config/testthat/edition": "3",
  "Encoding": "UTF-8",
  "LazyData": "true",
  "RoxygenNote": "7.3.3",
  "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev zlib1g-dev",
  "Repository": "https://nmoiroux.r-universe.dev",
  "Date/Publication": "2026-05-01 09:46:39 UTC",
  "RemoteUrl": "https://github.com/nmoiroux/ecoxcorr",
  "RemoteRef": "HEAD",
  "RemoteSha": "0936697d8620330696c4e99310e4018be970f244",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-05-31 06:28:48 UTC",
    "User": "root"
  },
  "Author": "Nicolas Moiroux [aut, cre] (ORCID:\n<https://orcid.org/0000-0001-6755-6167>),\nColombine Bartholomée [aut] (ORCID:\n<https://orcid.org/0000-0001-7291-5195>),\nPaul Taconet [aut] (ORCID: <https://orcid.org/0000-0001-7429-7204>)",
  "Maintainer": "Nicolas Moiroux <nicolas.moiroux@ird.fr>",
  "MD5sum": "d534e854a17c29e3d6aab66d3916d1c5",
  "_user": "nmoiroux",
  "_type": "src",
  "_file": "ecoXCorr_0.2.2.tar.gz",
  "_fileid": "b168e6425695428faaec5686b12de90a59706a0e490a84a74e1e19196b8b4493",
  "_filesize": 331005,
  "_sha256": "b168e6425695428faaec5686b12de90a59706a0e490a84a74e1e19196b8b4493",
  "_created": "2026-05-31T06:28:48.000Z",
  "_published": "2026-05-31T06:48:11.560Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 78705582786,
      "time": 190,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7314448312"
    },
    {
      "job": 78705582776,
      "time": 188,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7314448181"
    },
    {
      "job": 78705582783,
      "time": 209,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7314544890"
    },
    {
      "job": 78705582796,
      "time": 171,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7314521208"
    },
    {
      "job": 78705355160,
      "time": 255,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7314427503"
    },
    {
      "job": 78705582780,
      "time": 126,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7314441411"
    },
    {
      "job": 78705582785,
      "time": 133,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7314442227"
    },
    {
      "job": 78705582788,
      "time": 122,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7314441012"
    },
    {
      "job": 78705582782,
      "time": 166,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7314441566"
    }
  ],
  "_buildurl": "https://github.com/r-universe/nmoiroux/actions/runs/26705309258",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/nmoiroux/ecoxcorr",
  "_commit": {
    "id": "0936697d8620330696c4e99310e4018be970f244",
    "author": "Nmoiroux <n.moiroux@gmail.com>",
    "committer": "Nmoiroux <n.moiroux@gmail.com>",
    "message": "add revdep\n",
    "time": 1777628799
  },
  "_maintainer": {
    "name": "Nicolas Moiroux",
    "email": "nicolas.moiroux@ird.fr",
    "login": "nmoiroux",
    "bluesky": "@nmoiroux.bsky.social",
    "orcid": "0000-0001-6755-6167",
    "description": "",
    "uuid": 43449799
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 3.5",
      "role": "Depends"
    },
    {
      "package": "ggplot2",
      "role": "Imports"
    },
    {
      "package": "glmmTMB",
      "role": "Imports"
    },
    {
      "package": "performance",
      "role": "Imports"
    },
    {
      "package": "Rdpack",
      "role": "Imports"
    },
    {
      "package": "scales",
      "role": "Imports"
    },
    {
      "package": "shiny",
      "role": "Imports"
    },
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    }
  ],
  "_owner": "nmoiroux",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-06",
      "n": 45
    },
    {
      "week": "2026-07",
      "n": 62
    },
    {
      "week": "2026-08",
      "n": 3
    },
    {
      "week": "2026-09",
      "n": 1
    },
    {
      "week": "2026-12",
      "n": 6
    },
    {
      "week": "2026-13",
      "n": 31
    },
    {
      "week": "2026-14",
      "n": 13
    },
    {
      "week": "2026-15",
      "n": 5
    },
    {
      "week": "2026-18",
      "n": 9
    }
  ],
  "_tags": [
    {
      "name": "v0.1.0",
      "date": "2026-02-04"
    },
    {
      "name": "v0.1.1",
      "date": "2026-02-06"
    },
    {
      "name": "v0.1.2",
      "date": "2026-02-09"
    },
    {
      "name": "v0.1.3",
      "date": "2026-02-10"
    },
    {
      "name": "v0.1.4",
      "date": "2026-02-10"
    },
    {
      "name": "v0.1.5",
      "date": "2026-02-10"
    },
    {
      "name": "v0.1.6",
      "date": "2026-02-11"
    },
    {
      "name": "v0.1.7",
      "date": "2026-02-12"
    },
    {
      "name": "v0.1.8",
      "date": "2026-02-12"
    },
    {
      "name": "v.0.1.81",
      "date": "2026-02-21"
    },
    {
      "name": "v0.1.9",
      "date": "2026-03-16"
    },
    {
      "name": "v0.2.1",
      "date": "2026-04-01"
    },
    {
      "name": "v0.2.2",
      "date": "2026-05-01"
    }
  ],
  "_stars": 1,
  "_contributors": [
    {
      "user": "nmoiroux",
      "count": 178,
      "uuid": 43449799
    }
  ],
  "_userbio": {
    "uuid": 43449799,
    "type": "user",
    "name": "Nicolas Moiroux"
  },
  "_downloads": {
    "count": 506,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/ecoXCorr"
  },
  "_devurl": "https://github.com/nmoiroux/ecoxcorr",
  "_searchresults": 0,
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/ecoXCorr.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/nmoiroux/ecoxcorr",
  "_realowner": "nmoiroux",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.9",
      "date": "2026-03-24"
    },
    {
      "version": "0.2.1",
      "date": "2026-04-01"
    },
    {
      "version": "0.2.2",
      "date": "2026-05-01"
    }
  ],
  "_exports": [
    "aggregate_lagged_intervals",
    "ecoXCorr",
    "ecoXCorrApp",
    "fit_models_by_lag",
    "plotCCM"
  ],
  "_datasets": [
    {
      "name": "albopictusMPL2023",
      "title": "Entomological records of female *Aedes albopictus* in Montpellier (2023)",
      "object": "albopictusMPL2023",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "species",
        "individualCount",
        "eventDate",
        "trap",
        "area",
        "date",
        "ID"
      ],
      "rows": 126,
      "table": true,
      "tojson": true
    },
    {
      "name": "meteoMPL2023",
      "title": "Daily meteorological conditions in Montpellier (2023)",
      "object": "meteoMPL2023",
      "class": [
        "tbl_df",
        "tbl",
        "data.frame"
      ],
      "fields": [
        "date",
        "pres_mean",
        "pres_min",
        "pres_max",
        "wind_mean",
        "wind_min",
        "wind_max",
        "temp_mean",
        "temp_min",
        "temp_max",
        "dew.p_mean",
        "dew.p_min",
        "dew.p_max",
        "rh_mean",
        "rh_min",
        "rh_max",
        "rain_mean",
        "rain_min",
        "rain_max",
        "rain_sum"
      ],
      "rows": 365,
      "table": true,
      "tojson": true
    }
  ],
  "_help": [
    {
      "page": "aggregate_lagged_intervals",
      "title": "Aggregate meteorological time series over multiple lagged time intervals",
      "topics": [
        "aggregate_lagged_intervals"
      ]
    },
    {
      "page": "albopictusMPL2023",
      "title": "Entomological records of female *Aedes albopictus* in Montpellier (2023)",
      "topics": [
        "albopictusMPL2023"
      ]
    },
    {
      "page": "ecoXCorr",
      "title": "Run a complete ecoXCorr analysis: aggregation + lagged modelling",
      "topics": [
        "ecoXCorr"
      ]
    },
    {
      "page": "ecoXCorrApp",
      "title": "Launch the ecoXCorr Shiny application",
      "topics": [
        "ecoXCorrApp"
      ]
    },
    {
      "page": "fit_models_by_lag",
      "title": "Fit regression models by lag window on aggregated meteorological predictors",
      "topics": [
        "fit_models_by_lag"
      ]
    },
    {
      "page": "meteoMPL2023",
      "title": "Daily meteorological conditions in Montpellier (2023)",
      "topics": [
        "meteoMPL2023"
      ]
    },
    {
      "page": "plotCCM",
      "title": "Plot a cross-correlation map (CCM) from lagged regression results",
      "topics": [
        "plotCCM"
      ]
    }
  ],
  "_readme": "https://github.com/nmoiroux/ecoxcorr/raw/HEAD/README.md",
  "_rundeps": [
    "backports",
    "base64enc",
    "bayestestR",
    "boot",
    "broom",
    "bslib",
    "cachem",
    "cli",
    "colorspace",
    "commonmark",
    "cowplot",
    "cpp11",
    "datawizard",
    "Deriv",
    "digest",
    "doBy",
    "dplyr",
    "farver",
    "fastmap",
    "fontawesome",
    "forecast",
    "fracdiff",
    "fs",
    "generics",
    "ggplot2",
    "glmmTMB",
    "glue",
    "gtable",
    "htmltools",
    "httpuv",
    "insight",
    "isoband",
    "jquerylib",
    "jsonlite",
    "labeling",
    "later",
    "lattice",
    "lifecycle",
    "lme4",
    "lmtest",
    "magrittr",
    "MASS",
    "Matrix",
    "memoise",
    "mgcv",
    "microbenchmark",
    "mime",
    "minqa",
    "modelr",
    "nlme",
    "nloptr",
    "nnet",
    "numDeriv",
    "otel",
    "pbkrtest",
    "performance",
    "pillar",
    "pkgconfig",
    "promises",
    "purrr",
    "R6",
    "rappdirs",
    "rbibutils",
    "RColorBrewer",
    "Rcpp",
    "RcppArmadillo",
    "RcppEigen",
    "Rdpack",
    "reformulas",
    "rlang",
    "S7",
    "sandwich",
    "sass",
    "scales",
    "shiny",
    "sourcetools",
    "stringi",
    "stringr",
    "tibble",
    "tidyr",
    "tidyselect",
    "timeDate",
    "TMB",
    "urca",
    "utf8",
    "vctrs",
    "viridisLite",
    "withr",
    "xtable",
    "zoo"
  ],
  "_score": 3.6532125137753435,
  "_indexed": true,
  "_nocasepkg": "ecoxcorr",
  "_universes": [
    "nmoiroux"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.2.2",
      "date": "2026-05-31T06:31:33.000Z",
      "distro": "noble",
      "commit": "0936697d8620330696c4e99310e4018be970f244",
      "fileid": "f359d79c05cf8bf981c51d502ee87143b28cd595924795f77ed58e73c3b5fdf8",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nmoiroux/actions/runs/26705309258"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.2.2",
      "date": "2026-05-31T06:31:37.000Z",
      "distro": "noble",
      "commit": "0936697d8620330696c4e99310e4018be970f244",
      "fileid": "35ced89360fec748700948417b9576e83bf77cbe2b98ba9c40aa2e27c3f1ce71",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nmoiroux/actions/runs/26705309258"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.2.2",
      "date": "2026-05-31T06:46:51.000Z",
      "commit": "0936697d8620330696c4e99310e4018be970f244",
      "fileid": "a742e397cd67791fa9f6d13978ad3de4064ac32b01f0768fcef86461b71add28",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nmoiroux/actions/runs/26705309258"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.2.2",
      "date": "2026-05-31T06:42:47.000Z",
      "commit": "0936697d8620330696c4e99310e4018be970f244",
      "fileid": "06d432f8d0105345d09e2ef405e502c6f35261d7fb30f3ab7c583c581d2848a9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nmoiroux/actions/runs/26705309258"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.2.2",
      "date": "2026-05-31T06:31:23.000Z",
      "commit": "0936697d8620330696c4e99310e4018be970f244",
      "fileid": "2628c4eb75f550a0e4eedfc2ca5f6f5a3e1665c1bd0bc68b2833fb814bcdd24f",
      "status": "success",
      "buildurl": "https://github.com/r-universe/nmoiroux/actions/runs/26705309258"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.2.2",
      "date": "2026-05-31T06:30:29.000Z",
      "commit": "0936697d8620330696c4e99310e4018be970f244",
      "fileid": "19e9d178a3cb560646ed57009bbc36701d762fbc0c72dae9524fbfac1df0e227",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nmoiroux/actions/runs/26705309258"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.2.2",
      "date": "2026-05-31T06:30:19.000Z",
      "commit": "0936697d8620330696c4e99310e4018be970f244",
      "fileid": "c5549809af9d6ab5cd694b55423f6f955a4257c884e9574b8bed68b9468bcf6e",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nmoiroux/actions/runs/26705309258"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.2.2",
      "date": "2026-05-31T06:30:21.000Z",
      "commit": "0936697d8620330696c4e99310e4018be970f244",
      "fileid": "4aaa28ef3208f4a48bb504844feb3e4ff1f22292960fbe3f6442ff270268e4a9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/nmoiroux/actions/runs/26705309258"
    }
  ]
}